Human protein Atlas
IntAct
Cistrome
Expression Atlas
ARCHS4 (RNA Seq)
GTEx
Metascape
Depmap portal
cBioPortal
Histone modification play an important role in gene regulation and based on different histon modification signatures, it can be used to annotate different chromatin states. The following picture pr...
This posts mainly consists of the links to different genomic data. UCSC Data links UCSC hg19 ftp site hg19 fasta liftover chain files phastcon 100 way score phylop 100 way score multi ...
To find the closest gene to the given genomic region, we will be using bedtools closest. Fist lets see our region of interest $ cat input_region.bed chr16 566689 566964 id . + $ head -n 8 gencode...
Generate Frequency count table and motif logo from given fasta sequences
Divide pandas dataframe into bins
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